plastid.genomics package¶
This package contains several object types useful for genomic analyses.
Package overview¶
Submodule
Description
Array-like objects indexed by chromosome, position, and strand
Dictionary-like objects associate features with genomic positions, allowing fast query of which features overlap a region or nucleotide
Objects that represent genomic features, such as genes or transcripts
Functions for manipulating nucleic acid sequences
Functions for manipulating splice junctions
Submodules¶
- plastid.genomics.c_common module
- plastid.genomics.c_common module
- plastid.genomics.c_common module
- plastid.genomics.genome_array module
- plastid.genomics.genome_hash module
- plastid.genomics.map_factories module
- plastid.genomics.map_factories module
- plastid.genomics.map_factories module
- plastid.genomics.roitools module
- plastid.genomics.roitools module
- plastid.genomics.roitools module
- plastid.genomics.seqtools module
- plastid.genomics.splicing module